PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG024760.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 593aa MW: 67056 Da PI: 8.7074 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 75.2 | 7.3e-24 | 126 | 227 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae+ ++++++ +l+ +d++g++W++++i+r++++r++lt+GW+ F +a++L +gD+v+F + TRIDC6BG024760.7 126 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQQPPAQ--ELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSIFISAKRLVAGDSVLFI--W 214 99*****************************86555544..8************************************************..7 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ +l+++++r+ TRIDC6BG024760.7 215 NDNNQLLLGIRRA 227 777778***9997 PP | |||||||
2 | Auxin_resp | 121.5 | 6.4e-40 | 252 | 335 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPras+seFv++++k++ka++ +++svGmRf+m fete+ss rr++Gt++g+sdldp rWpnS+Wrs+k TRIDC6BG024760.7 252 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVK 335 79*********************************9789******************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 593 aa Download sequence |
MPSSQTIFPF SVSEEHKCLN SELWHACAGP LVSLPAVGSR VLYFPQGHSE QVSASTNKEM 60 ESQIPNYPNL PAQLICQLHN VTMHADAETD EVYAQMTLQP LSPQELKDPF LPAELGNASK 120 QPTNYFCKTL TASDTSTHGG FSVPRRAAEK VFPPLDFTQQ PPAQELMAKD LHGNEWKFRH 180 IFRGQPKRHL LTTGWSIFIS AKRLVAGDSV LFIWNDNNQL LLGIRRANRS QTVMPSSVLS 240 SDSMHIGLLA AAAHAASTNS RFTIFYNPRA SPSEFVIPLA KYVKAVYHTR ISVGMRFRML 300 FETEESSVRR YMGTITGISD LDPARWPNSH WRSVKVGWDE STAGERQPRV SLWEIEPLTT 360 YPMYSSPFPM RLKRPWPTGL PSLYGTSGKE DDLTSSLMWL RDGANPGFQS FNFGGLGMSP 420 WMQPRMDSSL LGLQPDMYQA MSAAAFQNTT KQVSPTLLQF QQPQNIAGRS ALLSSQILQQ 480 VQPQFQEMHH QNINDSAIQG HNQPEYLQQQ LQRCQSFNGQ KSPLPQQQES HHQHQQQQSQ 540 CMQTPQHQQI FPPPISLHLP HCRQFQRSHS SRTFKTEISA LFLHRISRPC MTH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30330.2 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG024760.7 |