PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG021410.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 355aa    MW: 39163.9 Da    PI: 9.1262
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG021410.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.41.3e-0959105652
                        S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
           Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 
                        ++ +e +++L + F+++  p +e +e L+++lg++ +++  WF+N R
  TRIDC6BG021410.14  59 RIPPEAVQVLRKSFAESELPAREVKESLSTELGISFEKIDKWFKNTR 105
                        667899***************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MFGKLTENEK QSEDEDWGTN NRRKKRRVHS AGVGVKSAEG LSDVKSNEKA QPQRRKLFRI  60
PPEAVQVLRK SFAESELPAR EVKESLSTEL GISFEKIDKW FKNTRCAALR DRKAEGNSRV  120
AGPSKRSRRS AGKSGSSVKI DSVDNSYLIP ASEIISVPTH PQGIPERKPE STSRTVRRLV  180
HDKGAPLCPP AEVKESTSPT TKPGLNPSHV ADRIINTEHR AASREAPVAF SDDPFFDAIL  240
SYPTINTNDR AVSREDPLAF SDDPFLDVML ANRDIYTEER AVSHEDVKRP SGDQPFLDVI  300
QNVCGLEHRL QRLKGDMLSS GAAPGGAGTA ERDLQNQLVV LVPTAELKDK SQPSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.17e-23HB-PHD family protein