PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG020370.14

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 1131aa MW: 125745 Da PI: 6.3604

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG020370.14	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.3	2.6e-22	132	233	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae++ +++++++ +l+ +d + ++W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F + TRIDC6BG020370.14 132 FCKTLTASDTSTHGGFSVPRRAAEKIfpsldfSLQPPCQ-ELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVSGKKLFAGDSVIFV--R 220 99****************************9999986.*********************************************..5 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++++l+++++r+ TRIDC6BG020370.14 221 DEKQQLLLGIRRA 233 688889**997 PP
2	Auxin_resp	114	1.4e-37	258	341	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha +++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+ e+e+ +rr++Gt++g+sdldpvrW+nS+WrsL+ TRIDC6BG020370.14 258 AAHASANTSPFTIFYNPRASPTEFVIPFAKYQKAMYsNQISLGMRFRMMCEMEELGTRRYMGTITGISDLDPVRWKNSQWRSLQ 341 799******************************989******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1131 aa Download sequence
MAQSPASSAV AAPAPCEGER KAPAINGELW HACAGPLVSL PPVGSLVVYF PQGHSEQVAA 60 SMQKDVEAHV PSYPNLPSKL ICLLHSVTLQ ADPDTDEVYA QMTLQPVNTY AKEALQLSEL 120 ALRQARPQME FFCKTLTASD TSTHGGFSVP RRAAEKIFPS LDFSLQPPCQ ELQARDIHDN 180 VWTFRHIFRG QPKRHLLTTG WSLFVSGKKL FAGDSVIFVR DEKQQLLLGI RRANRQPTNI 240 SSSVLSSDSM HIGVLAAAAH ASANTSPFTI FYNPRASPTE FVIPFAKYQK AMYSNQISLG 300 MRFRMMCEME ELGTRRYMGT ITGISDLDPV RWKNSQWRSL QVGWDESAAG ERRNRVSIWE 360 IEPLAAPFFI CPQPFFGVKR PRQLDDESLE MESLLKRAMP WLGEEVCIKD PQTQSVTMPG 420 LSLVQWMNMN RQQSSSLAST AMQSEYYRSA SNPAMQNIGA ADLARQLYMQ NHLLQQNSMQ 480 FNPPKLHQQM KPINDLSNAA LPLNQLGAIR NHQDQKQDQQ RQQQSSIQAI PLSQAHPQTN 540 NVQAQVILQN QMQQQQQQKQ PPPSPTQNQH GSSGQHLLQS HQLQDQNLQM QQQQLLLHQQ 600 LQQQQQQQLN KLPGQLANLA SQQTQLSEQE LHLQLLQKLQ QQSLMSQSAV TLSRLPIIQE 660 QQNFLVDMQQ QLSNSHSLAQ QQVMPQQDCR TSSLQTTQLP PPIQQEQQQQ KPSQKQVAPT 720 YVSEAAFAQI SSTSVIPKTG NTMIVPGAAQ SAVTEEIPSC STSPSTANGN HLAQPTIGRN 780 DHCKVSTEKV PHSIAQMSIL TPIEAVSVTP VTTKELPKLN NGVKSSAITS KLPNVVSGLQ 840 NFMNNALPTD NLETASSATS LWPSQTDGLL HQGFATSNFN QHQMFKDELP DVEIQGVDPS 900 NSALFGMNND GPLGFPMETE GLLENALDSV KYQNHFSTDD ENNYQMQKDA RQEISTSMVS 960 QSFGQSDMAF NSIDSAINDG ALMNRSSWPP AAPPQRMRTF TKVYKRGAVG RSIDIGRFSG 1020 YGELNQALAR MFGIEGQLED RQRIGWKLVY TDHEDDVLLL GDDPWEEFVN CVKCIRILSP 1080 QEVQKMSLDG DLGSNVLPNQ ACSSSDGGNT WKPRYEQNSG NPSIGPYDQF E

Sequence ? help Back to Top

Protein Sequence Length: 1131 aa Download sequence

MAQSPASSAV AAPAPCEGER KAPAINGELW HACAGPLVSL PPVGSLVVYF PQGHSEQVAA  60
SMQKDVEAHV PSYPNLPSKL ICLLHSVTLQ ADPDTDEVYA QMTLQPVNTY AKEALQLSEL  120
ALRQARPQME FFCKTLTASD TSTHGGFSVP RRAAEKIFPS LDFSLQPPCQ ELQARDIHDN  180
VWTFRHIFRG QPKRHLLTTG WSLFVSGKKL FAGDSVIFVR DEKQQLLLGI RRANRQPTNI  240
SSSVLSSDSM HIGVLAAAAH ASANTSPFTI FYNPRASPTE FVIPFAKYQK AMYSNQISLG  300
MRFRMMCEME ELGTRRYMGT ITGISDLDPV RWKNSQWRSL QVGWDESAAG ERRNRVSIWE  360
IEPLAAPFFI CPQPFFGVKR PRQLDDESLE MESLLKRAMP WLGEEVCIKD PQTQSVTMPG  420
LSLVQWMNMN RQQSSSLAST AMQSEYYRSA SNPAMQNIGA ADLARQLYMQ NHLLQQNSMQ  480
FNPPKLHQQM KPINDLSNAA LPLNQLGAIR NHQDQKQDQQ RQQQSSIQAI PLSQAHPQTN  540
NVQAQVILQN QMQQQQQQKQ PPPSPTQNQH GSSGQHLLQS HQLQDQNLQM QQQQLLLHQQ  600
LQQQQQQQLN KLPGQLANLA SQQTQLSEQE LHLQLLQKLQ QQSLMSQSAV TLSRLPIIQE  660
QQNFLVDMQQ QLSNSHSLAQ QQVMPQQDCR TSSLQTTQLP PPIQQEQQQQ KPSQKQVAPT  720
YVSEAAFAQI SSTSVIPKTG NTMIVPGAAQ SAVTEEIPSC STSPSTANGN HLAQPTIGRN  780
DHCKVSTEKV PHSIAQMSIL TPIEAVSVTP VTTKELPKLN NGVKSSAITS KLPNVVSGLQ  840
NFMNNALPTD NLETASSATS LWPSQTDGLL HQGFATSNFN QHQMFKDELP DVEIQGVDPS  900
NSALFGMNND GPLGFPMETE GLLENALDSV KYQNHFSTDD ENNYQMQKDA RQEISTSMVS  960
QSFGQSDMAF NSIDSAINDG ALMNRSSWPP AAPPQRMRTF TKVYKRGAVG RSIDIGRFSG  1020
YGELNQALAR MFGIEGQLED RQRIGWKLVY TDHEDDVLLL GDDPWEEFVN CVKCIRILSP  1080
QEVQKMSLDG DLGSNVLPNQ ACSSSDGGNT WKPRYEQNSG NPSIGPYDQF E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20730.2	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG020370.14