PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG019820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 473aa MW: 51172.2 Da PI: 9.5307 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.4 | 7.7e-42 | 185 | 261 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+adls++k+yhr+h+vCe hskap+v+v+gle+rfCqqCsrfh+l efD++krsCrrrL++hn+rrrk+q+ TRIDC6BG019820.1 185 CQVEGCKADLSSVKDYHRKHRVCELHSKAPKVVVAGLERRFCQQCSRFHALAEFDQKKRSCRRRLNDHNSRRRKPQP 261 **************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence |
MGSFGMEWNQ RSSVLWDWEN FPPIGNNPKN AMQADPRFAG VAATMGNEPL HSSGGSGTFS 60 SSSEMGYGSS KSSMSASIDS SSRAGNNMEF RFAPVKNPDR NTSKNPELGK VDNTRTGTSP 120 SSVVAVSSGE PVIGLKLGKR TYFEDVCGGQ SVKSLPSGAA SAPNKSPALG KKAKAEQQKP 180 HNSYCQVEGC KADLSSVKDY HRKHRVCELH SKAPKVVVAG LERRFCQQCS RFHALAEFDQ 240 KKRSCRRRLN DHNSRRRKPQ PEAISFSSSR MSTMFYDARQ QPNFLFGQAP YVQMRSCGSS 300 SWDDPGGFKV THTKAPWLKP TTAAGVHGMH LSSQQMSDNI MPHGAHHGFD GFMAFKGTCI 360 KFPNQGVQAS AVASDSSGAP DLQHALSLLS SNPVGAANLQ PSPQMHSGVA AIAGAPNPAM 420 HVLGSSTGLW LDGGQPLDDH PRFQVFERLG DHDSELQLPK PSYDHASHFD RMH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 241 | 258 | KKRSCRRRLNDHNSRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 7e-45 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG019820.1 |