PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG017850.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 379aa    MW: 41691.6 Da    PI: 4.5796
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG017850.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-18113162255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +++G+r+++ +g+W+AeIrdps+    +r++lg+f +aeeAa+a++  +++++g
  TRIDC6BG017850.3 113 QFRGIRQRP-WGKWAAEIRDPSK---GARVWLGTFNSAEEAARAYDVEARRIRG 162
                       69*******.**********965...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MCGGAPLADV KVPTVTRRMT KEALWPEKKK PRHGGSGGQR VMGLGGRRGP GLDDNEEDFE  60
ADSGDSDLDL ERSMVDEKDG DDEVSEIKSF APVKSSLSQG FDGPSAKRKR KNQFRGIRQR  120
PWGKWAAEIR DPSKGARVWL GTFNSAEEAA RAYDVEARRI RGNKAKVNFP KEPTVPQKRR  180
ARPAAPKAPK RSVAHEPSVM SSINNLANPN AFIYPSADFA SNQPLALPDN VSFVPAMNFV  240
APVEAFVMNP YSDQGSNSFG CSDLDWDYDT KTPDIPFIAP ISTIAEEAES ALAQSNAYNS  300
VVIAEAAESA LAQSNTYNPV MPRVMENNDV DFEAWTRFLM DDSVDEPIDS LLNFNVPQDV  360
IVNMDLWSFD DIPMCGELL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.32e-33ERF family protein