PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG017010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 411aa    MW: 46316.7 Da    PI: 5.8839
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG017010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000344467223
                      EETTTTEEESSHHHHHHHHHH..T CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirt..H 23
                      +C dCgk+++++ +   H ++  H
  TRIDC6BG017010.1 44 VCADCGKPCRSQTEVDLHRKRtgH 67
                      7*****************998666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    
MAGLSLRCGD CGVQLRSVEE AQAHAEATSH TNFAESTEAV LNLVCADCGK PCRSQTEVDL  60
HRKRTGHAEF TDKTMEAAKP IDLEAPPKPA LEAMDVDASG SAEPQELVAP EVNKEMLGEL  120
ESMGFSTARA TRALHFSGNS TIEGAINWLS EHQEDPDIDE MPMVPANTEA NKPSLTEEEK  180
KIKAQELRER ARKKKEEEEK RMEREREKER IRIGKELLEA KKMEELNERK RIIELRRLEK  240
EEEKRAREKI RQKLEEDKAE RRRKLGLPAE APAASKPSAP PPVEEKKSAF LPVRPATKAE  300
RMRDCLRNIK QQNKEEDAKV KRAFQTLLTY IGNVVKNPDE EKFRKIRLTN ATFQERVGSL  360
GGIEFLVLCG FEKPEGEEIL FLARDKVDKA VLNVAGAELN SAITNPFFGV L