PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG009320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 223aa MW: 24384.2 Da PI: 6.0096 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 122 | 3.1e-38 | 15 | 115 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkC+++Cv+ap+f++eq +++f ++hk+FGasnv+kll++lp +r++a++++ yeA+ar++dPvyG+v++i++lqqq +l+a TRIDC6BG009320.1 15 PCGACKFLRRKCVNGCVFAPHFCHEQgAAHFGAIHKVFGASNVSKLLTSLPAIDRREAAATISYEAQARLHDPVYGCVAHIFALQQQAVNLQA 107 7*************************89***************************************************************** PP DUF260 93 elallkee 100 +l++lk++ TRIDC6BG009320.1 108 QLESLKAQ 115 ***99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
NIDQVAGAMT GFSSPCGACK FLRRKCVNGC VFAPHFCHEQ GAAHFGAIHK VFGASNVSKL 60 LTSLPAIDRR EAAATISYEA QARLHDPVYG CVAHIFALQQ QAVNLQAQLE SLKAQAPQGY 120 TNTYSASSPE EDSIKAEVMA CQKGEARMPR PAELCPSVKS ESESYFGNGL MTCNSMQSSQ 180 DYNISHVYTP DYTAPFNDDG IHSSTMFPVD IQEYLQENGN YWH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42440.1 | 2e-51 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG009320.1 |