PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG058420.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 708aa MW: 81766.6 Da PI: 5.5524

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG058420.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.8	9.9e-20	96	180	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6AG058420.8 96 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 180 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MDDDEEAAIA LSVKLERNAS YVDRSLQLVT AEEHDVMEID DISSDDTGSQ SDSDSSSGSE 60 SEKEEGRFFY PAPEALGTVK APQVGMKFPT LEDAHEYYNT YALQTGFVVV RGRNYKRQRF 120 QLDCNRNRKV KLVEDLNLKR KRKKNVIEKT NCQAKIIVKL IKGEWVIAAV QNEHNHPLSP 180 SRSFTRFLTS QKHMSPEERS FSRVLQQSRV PPGEILKILR RMSGFFRELP SKEKQALILQ 240 SAEQWRKANL DVEKTLNHFE QLQLQDPCFF YTVQKDEDGT LRSIFWTDAR SRMDYEIFGD 300 FVSFNTTFST NRHNMPFVPI TGMNSRGRTI VLGCALLQDR KAETYKWMLE TFLQEMGGGQ 360 IPRSVITSQD EAMAKAIAEV MPQARHRFCR WNGKAQEKMA AFVAARGNMK AELDILVDSS 420 LTETEFEQGW SALIQRHDAS ENEYLQLLWE MRKTWAPVYF MQDFFPFVVS ARGSQGAFSL 480 FKENVLPKDK IENLIEKYEE MQDKIKKTDE EDVLEAATEP SCFSLQPIER HASRVYTRQI 540 FLKVQKELLH STAFKVQEIE RGTLYRLDKA YSYENPEYDR DSFEVSIEPG LTDTYTCQCT 600 KFARDGILCC HVFRLFTQFG IDEIPEKYIV ARWTDGFREE QLERREEGRL VVAAQREEDA 660 ARYAALMSKA AGIGREICGD GAKCDEFMLE LDRIREKMAT MAMANDHV

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MDDDEEAAIA LSVKLERNAS YVDRSLQLVT AEEHDVMEID DISSDDTGSQ SDSDSSSGSE  60
SEKEEGRFFY PAPEALGTVK APQVGMKFPT LEDAHEYYNT YALQTGFVVV RGRNYKRQRF  120
QLDCNRNRKV KLVEDLNLKR KRKKNVIEKT NCQAKIIVKL IKGEWVIAAV QNEHNHPLSP  180
SRSFTRFLTS QKHMSPEERS FSRVLQQSRV PPGEILKILR RMSGFFRELP SKEKQALILQ  240
SAEQWRKANL DVEKTLNHFE QLQLQDPCFF YTVQKDEDGT LRSIFWTDAR SRMDYEIFGD  300
FVSFNTTFST NRHNMPFVPI TGMNSRGRTI VLGCALLQDR KAETYKWMLE TFLQEMGGGQ  360
IPRSVITSQD EAMAKAIAEV MPQARHRFCR WNGKAQEKMA AFVAARGNMK AELDILVDSS  420
LTETEFEQGW SALIQRHDAS ENEYLQLLWE MRKTWAPVYF MQDFFPFVVS ARGSQGAFSL  480
FKENVLPKDK IENLIEKYEE MQDKIKKTDE EDVLEAATEP SCFSLQPIER HASRVYTRQI  540
FLKVQKELLH STAFKVQEIE RGTLYRLDKA YSYENPEYDR DSFEVSIEPG LTDTYTCQCT  600
KFARDGILCC HVFRLFTQFG IDEIPEKYIV ARWTDGFREE QLERREEGRL VVAAQREEDA  660
ARYAALMSKA AGIGREICGD GAKCDEFMLE LDRIREKMAT MAMANDHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	145	LKRKRKKN
2	140	144	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-77	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG058420.8