PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG058420.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 708aa MW: 81766.6 Da PI: 5.5524 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 62.8 | 9.9e-20 | 96 | 180 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6AG058420.7 96 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 180 69*******************9......4677******9988755543799999******************.9***************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 708 aa Download sequence |
MDDDEEAAIA LSVKLERNAS YVDRSLQLVT AEEHDVMEID DISSDDTGSQ SDSDSSSGSE 60 SEKEEGRFFY PAPEALGTVK APQVGMKFPT LEDAHEYYNT YALQTGFVVV RGRNYKRQRF 120 QLDCNRNRKV KLVEDLNLKR KRKKNVIEKT NCQAKIIVKL IKGEWVIAAV QNEHNHPLSP 180 SRSFTRFLTS QKHMSPEERS FSRVLQQSRV PPGEILKILR RMSGFFRELP SKEKQALILQ 240 SAEQWRKANL DVEKTLNHFE QLQLQDPCFF YTVQKDEDGT LRSIFWTDAR SRMDYEIFGD 300 FVSFNTTFST NRHNMPFVPI TGMNSRGRTI VLGCALLQDR KAETYKWMLE TFLQEMGGGQ 360 IPRSVITSQD EAMAKAIAEV MPQARHRFCR WNGKAQEKMA AFVAARGNMK AELDILVDSS 420 LTETEFEQGW SALIQRHDAS ENEYLQLLWE MRKTWAPVYF MQDFFPFVVS ARGSQGAFSL 480 FKENVLPKDK IENLIEKYEE MQDKIKKTDE EDVLEAATEP SCFSLQPIER HASRVYTRQI 540 FLKVQKELLH STAFKVQEIE RGTLYRLDKA YSYENPEYDR DSFEVSIEPG LTDTYTCQCT 600 KFARDGILCC HVFRLFTQFG IDEIPEKYIV ARWTDGFREE QLERREEGRL VVAAQREEDA 660 ARYAALMSKA AGIGREICGD GAKCDEFMLE LDRIREKMAT MAMANDHV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 138 | 145 | LKRKRKKN |
2 | 140 | 144 | RKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 5e-77 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG058420.7 |