PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG058420.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 754aa MW: 86947.5 Da PI: 6.2063

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG058420.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.7	1.1e-19	142	226	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6AG058420.5 142 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 226 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 754 aa Download sequence
SKGYEKTPAP ACNVVKQARL DAGKQPVRRP RIQLLSHNRE ERSAELMDDD EEAAIALSVK 60 LERNASYVDR SLQLVTAEEH DVMEIDDISS DDTGSQSDSD SSSGSESEKE EGRFFYPAPE 120 ALGTVKAPQV GMKFPTLEDA HEYYNTYALQ TGFVVVRGRN YKRQRFQLDC NRNRKVKLVE 180 DLNLKRKRKK NVIEKTNCQA KIIVKLIKGE WVIAAVQNEH NHPLSPSRSF TRFLTSQKHM 240 SPEERSFSRV LQQSRVPPGE ILKILRRMSG FFRELPSKEK QALILQSAEQ WRKANLDVEK 300 TLNHFEQLQL QDPCFFYTVQ KDEDGTLRSI FWTDARSRMD YEIFGDFVSF NTTFSTNRHN 360 MPFVPITGMN SRGRTIVLGC ALLQDRKAET YKWMLETFLQ EMGGGQIPRS VITSQDEAMA 420 KAIAEVMPQA RHRFCRWNGK AQEKMAAFVA ARGNMKAELD ILVDSSLTET EFEQGWSALI 480 QRHDASENEY LQLLWEMRKT WAPVYFMQDF FPFVVSARGS QGAFSLFKEN VLPKDKIENL 540 IEKYEEMQDK IKKTDEEDVL EAATEPSCFS LQPIERHASR VYTRQIFLKV QKELLHSTAF 600 KVQEIERGTL YRLDKAYSYE NPEYDRDSFE VSIEPGLTDT YTCQCTKFAR DGILCCHVFR 660 LFTQFGIDEI PEKYIVARWT DGFREEQLER REEGRLVVAA QREEDAARYA ALMSKAAGIG 720 REICGDGAKC DEFMLELDRI REKMATMAMA NDHV

Sequence ? help Back to Top

Protein Sequence Length: 754 aa Download sequence

SKGYEKTPAP ACNVVKQARL DAGKQPVRRP RIQLLSHNRE ERSAELMDDD EEAAIALSVK  60
LERNASYVDR SLQLVTAEEH DVMEIDDISS DDTGSQSDSD SSSGSESEKE EGRFFYPAPE  120
ALGTVKAPQV GMKFPTLEDA HEYYNTYALQ TGFVVVRGRN YKRQRFQLDC NRNRKVKLVE  180
DLNLKRKRKK NVIEKTNCQA KIIVKLIKGE WVIAAVQNEH NHPLSPSRSF TRFLTSQKHM  240
SPEERSFSRV LQQSRVPPGE ILKILRRMSG FFRELPSKEK QALILQSAEQ WRKANLDVEK  300
TLNHFEQLQL QDPCFFYTVQ KDEDGTLRSI FWTDARSRMD YEIFGDFVSF NTTFSTNRHN  360
MPFVPITGMN SRGRTIVLGC ALLQDRKAET YKWMLETFLQ EMGGGQIPRS VITSQDEAMA  420
KAIAEVMPQA RHRFCRWNGK AQEKMAAFVA ARGNMKAELD ILVDSSLTET EFEQGWSALI  480
QRHDASENEY LQLLWEMRKT WAPVYFMQDF FPFVVSARGS QGAFSLFKEN VLPKDKIENL  540
IEKYEEMQDK IKKTDEEDVL EAATEPSCFS LQPIERHASR VYTRQIFLKV QKELLHSTAF  600
KVQEIERGTL YRLDKAYSYE NPEYDRDSFE VSIEPGLTDT YTCQCTKFAR DGILCCHVFR  660
LFTQFGIDEI PEKYIVARWT DGFREEQLER REEGRLVVAA QREEDAARYA ALMSKAAGIG  720
REICGDGAKC DEFMLELDRI REKMATMAMA NDHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	184	191	LKRKRKKN
2	186	190	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-76	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG058420.5