PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG058420.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 784aa MW: 90243.3 Da PI: 6.2763

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG058420.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.6	1.1e-19	172	256	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6AG058420.3 172 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 256 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 784 aa Download sequence
SNKRVIYIVA GDDGSHVPIL RKVQVYGEEA SKGYEKTPAP ACNVVKQARL DAGKQPVRRP 60 RIQLLSHNRE ERSAELMDDD EEAAIALSVK LERNASYVDR SLQLVTAEEH DVMEIDDISS 120 DDTGSQSDSD SSSGSESEKE EGRFFYPAPE ALGTVKAPQV GMKFPTLEDA HEYYNTYALQ 180 TGFVVVRGRN YKRQRFQLDC NRNRKVKLVE DLNLKRKRKK NVIEKTNCQA KIIVKLIKGE 240 WVIAAVQNEH NHPLSPSRSF TRFLTSQKHM SPEERSFSRV LQQSRVPPGE ILKILRRMSG 300 FFRELPSKEK QALILQSAEQ WRKANLDVEK TLNHFEQLQL QDPCFFYTVQ KDEDGTLRSI 360 FWTDARSRMD YEIFGDFVSF NTTFSTNRHN MPFVPITGMN SRGRTIVLGC ALLQDRKAET 420 YKWMLETFLQ EMGGGQIPRS VITSQDEAMA KAIAEVMPQA RHRFCRWNGK AQEKMAAFVA 480 ARGNMKAELD ILVDSSLTET EFEQGWSALI QRHDASENEY LQLLWEMRKT WAPVYFMQDF 540 FPFVVSARGS QGAFSLFKEN VLPKDKIENL IEKYEEMQDK IKKTDEEDVL EAATEPSCFS 600 LQPIERHASR VYTRQIFLKV QKELLHSTAF KVQEIERGTL YRLDKAYSYE NPEYDRDSFE 660 VSIEPGLTDT YTCQCTKFAR DGILCCHVFR LFTQFGIDEI PEKYIVARWT DGFREEQLER 720 REEGRLVVAA QREEDAARYA ALMSKAAGIG REICGDGAKC DEFMLELDRI REKMATMAMA 780 NDHV

Sequence ? help Back to Top

Protein Sequence Length: 784 aa Download sequence

SNKRVIYIVA GDDGSHVPIL RKVQVYGEEA SKGYEKTPAP ACNVVKQARL DAGKQPVRRP  60
RIQLLSHNRE ERSAELMDDD EEAAIALSVK LERNASYVDR SLQLVTAEEH DVMEIDDISS  120
DDTGSQSDSD SSSGSESEKE EGRFFYPAPE ALGTVKAPQV GMKFPTLEDA HEYYNTYALQ  180
TGFVVVRGRN YKRQRFQLDC NRNRKVKLVE DLNLKRKRKK NVIEKTNCQA KIIVKLIKGE  240
WVIAAVQNEH NHPLSPSRSF TRFLTSQKHM SPEERSFSRV LQQSRVPPGE ILKILRRMSG  300
FFRELPSKEK QALILQSAEQ WRKANLDVEK TLNHFEQLQL QDPCFFYTVQ KDEDGTLRSI  360
FWTDARSRMD YEIFGDFVSF NTTFSTNRHN MPFVPITGMN SRGRTIVLGC ALLQDRKAET  420
YKWMLETFLQ EMGGGQIPRS VITSQDEAMA KAIAEVMPQA RHRFCRWNGK AQEKMAAFVA  480
ARGNMKAELD ILVDSSLTET EFEQGWSALI QRHDASENEY LQLLWEMRKT WAPVYFMQDF  540
FPFVVSARGS QGAFSLFKEN VLPKDKIENL IEKYEEMQDK IKKTDEEDVL EAATEPSCFS  600
LQPIERHASR VYTRQIFLKV QKELLHSTAF KVQEIERGTL YRLDKAYSYE NPEYDRDSFE  660
VSIEPGLTDT YTCQCTKFAR DGILCCHVFR LFTQFGIDEI PEKYIVARWT DGFREEQLER  720
REEGRLVVAA QREEDAARYA ALMSKAAGIG REICGDGAKC DEFMLELDRI REKMATMAMA  780
NDHV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	214	221	LKRKRKKN
2	216	220	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-76	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG058420.3