PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG058420.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 802aa MW: 91975.2 Da PI: 6.5784

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG058420.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.6	1.2e-19	190	274	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6AG058420.2 190 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 274 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 802 aa Download sequence
SRVVAKSSNS SAKTPGSSSN KRVIYIVAGD DGSHVPILRK VQVYGEEASK GYEKTPAPAC 60 NVVKQARLDA GKQPVRRPRI QLLSHNREER SAELMDDDEE AAIALSVKLE RNASYVDRSL 120 QLVTAEEHDV MEIDDISSDD TGSQSDSDSS SGSESEKEEG RFFYPAPEAL GTVKAPQVGM 180 KFPTLEDAHE YYNTYALQTG FVVVRGRNYK RQRFQLDCNR NRKVKLVEDL NLKRKRKKNV 240 IEKTNCQAKI IVKLIKGEWV IAAVQNEHNH PLSPSRSFTR FLTSQKHMSP EERSFSRVLQ 300 QSRVPPGEIL KILRRMSGFF RELPSKEKQA LILQSAEQWR KANLDVEKTL NHFEQLQLQD 360 PCFFYTVQKD EDGTLRSIFW TDARSRMDYE IFGDFVSFNT TFSTNRHNMP FVPITGMNSR 420 GRTIVLGCAL LQDRKAETYK WMLETFLQEM GGGQIPRSVI TSQDEAMAKA IAEVMPQARH 480 RFCRWNGKAQ EKMAAFVAAR GNMKAELDIL VDSSLTETEF EQGWSALIQR HDASENEYLQ 540 LLWEMRKTWA PVYFMQDFFP FVVSARGSQG AFSLFKENVL PKDKIENLIE KYEEMQDKIK 600 KTDEEDVLEA ATEPSCFSLQ PIERHASRVY TRQIFLKVQK ELLHSTAFKV QEIERGTLYR 660 LDKAYSYENP EYDRDSFEVS IEPGLTDTYT CQCTKFARDG ILCCHVFRLF TQFGIDEIPE 720 KYIVARWTDG FREEQLERRE EGRLVVAAQR EEDAARYAAL MSKAAGIGRE ICGDGAKCDE 780 FMLELDRIRE KMATMAMAND HV

Sequence ? help Back to Top

Protein Sequence Length: 802 aa Download sequence

SRVVAKSSNS SAKTPGSSSN KRVIYIVAGD DGSHVPILRK VQVYGEEASK GYEKTPAPAC  60
NVVKQARLDA GKQPVRRPRI QLLSHNREER SAELMDDDEE AAIALSVKLE RNASYVDRSL  120
QLVTAEEHDV MEIDDISSDD TGSQSDSDSS SGSESEKEEG RFFYPAPEAL GTVKAPQVGM  180
KFPTLEDAHE YYNTYALQTG FVVVRGRNYK RQRFQLDCNR NRKVKLVEDL NLKRKRKKNV  240
IEKTNCQAKI IVKLIKGEWV IAAVQNEHNH PLSPSRSFTR FLTSQKHMSP EERSFSRVLQ  300
QSRVPPGEIL KILRRMSGFF RELPSKEKQA LILQSAEQWR KANLDVEKTL NHFEQLQLQD  360
PCFFYTVQKD EDGTLRSIFW TDARSRMDYE IFGDFVSFNT TFSTNRHNMP FVPITGMNSR  420
GRTIVLGCAL LQDRKAETYK WMLETFLQEM GGGQIPRSVI TSQDEAMAKA IAEVMPQARH  480
RFCRWNGKAQ EKMAAFVAAR GNMKAELDIL VDSSLTETEF EQGWSALIQR HDASENEYLQ  540
LLWEMRKTWA PVYFMQDFFP FVVSARGSQG AFSLFKENVL PKDKIENLIE KYEEMQDKIK  600
KTDEEDVLEA ATEPSCFSLQ PIERHASRVY TRQIFLKVQK ELLHSTAFKV QEIERGTLYR  660
LDKAYSYENP EYDRDSFEVS IEPGLTDTYT CQCTKFARDG ILCCHVFRLF TQFGIDEIPE  720
KYIVARWTDG FREEQLERRE EGRLVVAAQR EEDAARYAAL MSKAAGIGRE ICGDGAKCDE  780
FMLELDRIRE KMATMAMAND HV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	239	LKRKRKKN
2	234	238	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-76	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG058420.2