PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG057870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 258aa MW: 27188.1 Da PI: 7.2225 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.7 | 3.3e-19 | 27 | 77 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++ GVr+++ +grWvAeI+d + r++lg+f taeeAa+a+++a+ l+g TRIDC6AG057870.1 27 CKFVGVRQRP-SGRWVAEIKDtT-----HkIRVWLGTFETAEEAARAYDEAACLLRG 77 799*******.7*********33.....35**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
QQQQCQYEAA VGKAAAAAAK GRGSSKCKFV GVRQRPSGRW VAEIKDTTHK IRVWLGTFET 60 AEEAARAYDE AACLLRGSNT RTNFATAASA SPPPPRAPSQ QPAVTIRLAT AASNGSAGNN 120 TSSTSSTISF AMSASGAAAH HTPTPTSLSN HMTYHQWISH GSEQLHQHLE HQPWPATLSP 180 AVPTLAARRN VAECRVIADG ARPEKQDQDS ASPGAAMSGV VQQEQDDGFD IGNDPCDSLW 240 DLPPICQLSC LAGLSSCT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 6e-23 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG057870.1 |