PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG057480.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 314aa    MW: 34655.3 Da    PI: 8.6451
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG057480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.67.2e-1456104355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       + G+r+++ r rW AeIrdp     +  r +lg+f +aeeAa+a++  +++++g
  TRIDC6AG057480.1  56 FMGIRQRS-RARWGAEIRDPI----KgVRLWLGTFNSAEEAARAYDVEARRIHG 104
                       78***999.8*********72....46************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
RGFMGLGGLG VELGFDNDDV GFKANFKELD DLSTMTTNDV DGSAQRSAKR KSKNQFMGIR  60
QRSRARWGAE IRDPIKGVRL WLGTFNSAEE AARAYDVEAR RIHGKKAKIN FPEEPKLPQK  120
SRAPPASPKV PKPSVAQEHS FIPAFNNLVN QNAFVYPSAH FASKQPLVQP ENVPFVPPMS  180
TIAPVEAPVM NMYSDQGSNS FGFSKLGWKY HTKTPDISSI APISTIAEGA EPVLVKNNTY  240
NSLAPPIMEN NVVNFEPWMR YLMDDSVDEM IDSLLNFDVP RDVISNRTFG ASMPCPSVAN  300
FSVGSKPCIS GQRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.29e-30ERF family protein