PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG056340.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 303aa    MW: 33276.2 Da    PI: 6.9184
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG056340.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.61.1e-48101471128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrF P+deelv++yL  kv++++l+   +  + evd++ +ePw+Lp  +k +++ewyfFs rd+ky+tg r+nrat+sgyWkatgkd+ 
  TRIDC6AG056340.2  10 LPPGFRFYPSDEELVCHYLLSKVANQRLSGGAAgtMVEVDLHVHEPWELPDVAKLTTNEWYFFSFRDRKYTTGLRTNRATRSGYWKATGKDRV 102
                       79*************************76533334***************77777899*********************************** PP

               NAM  92 vlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + s         +++ vg++ktLvfy+grap+g kt Wvmhe+r+
  TRIDC6AG056340.2 103 IRSLrssssrsgHDAIVGMRKTLVFYRGRAPNGIKTCWVMHEFRI 147
                       *997555555544445***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGLRDIEMTL PPGFRFYPSD EELVCHYLLS KVANQRLSGG AAGTMVEVDL HVHEPWELPD  60
VAKLTTNEWY FFSFRDRKYT TGLRTNRATR SGYWKATGKD RVIRSLRSSS SRSGHDAIVG  120
MRKTLVFYRG RAPNGIKTCW VMHEFRIENP HSPPKEDWVL CRVFHQKKAD TEYAMDGKQE  180
PGGGGVAHKA AAVSGSNYVS SSSCYDPDQY QHSPSAPFPS LGAGGHHYQI TSCDHHHPDG  240
AAGVLHSNVD AFAGMPQLLS YETTLDFSQL LQGGGSAAAG LRDGADDQCG GALMDLGLQV  300
QEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.16e-75NAC family protein