PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG053770.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 676aa    MW: 72702.6 Da    PI: 6.611
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG053770.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.82.1e-27212265155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       +pr++W+ eLH++Fv a+++L G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
  TRIDC6AG053770.1 212 RPRVVWSVELHRKFVAALNHL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 265
                       59*******************.********************************8 PP
2Myb_DNA-binding33.31.1e-10214264148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v a + lG +   +k+I + m+ +++t++++ s++qky+
  TRIDC6AG053770.1 214 RVVWSVELHRKFVAALNHLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 264
                       678********************************99*************7 PP
3Response_reg76.97.5e-26231311109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl vdD+p+ +++l+++l++ +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge +++ + + 
  TRIDC6AG053770.1  23 VLAVDDDPVCLKVLETLLRRCQY-HVTATNQAVIALRMLRENRdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKTVMKGIT 113
                       799********************.***************99999********************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel++
  TRIDC6AG053770.1 114 HGACDYLLKPVRIEELRN 131
                       ****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 676 aa     Download sequence    
MRTDVRRGAA ATGRDQFPVG MRVLAVDDDP VCLKVLETLL RRCQYHVTAT NQAVIALRML  60
RENRDMFDLV ISDVHMPDMD GFKLLELVGL EMDLPVIMLS VNGETKTVMK GITHGACDYL  120
LKPVRIEELR NIWQHVVRRK FSTRDSVNLD TYEECNKPPS ADSDYVFGQV TCGSPDQSGR  180
PSKKRKEYHS EEEDEDEDSS GQDNDDPSAP KRPRVVWSVE LHRKFVAALN HLGIDKAVPK  240
RILELMNVEK LTRENVASHL QKYRLYLRRL SAVASQQAGI VAALGGRDPF LRMDAFEGLQ  300
GYQAFTSPAA LSTFSAHGLL NSPRNNQTAV VIQGVATSRS IPTGSSSCTT NPLIGDAAKY  360
HLSLPGNQHG NLGQGLATSL GQAQLQQKWM NEGSGDLSTI LSGNSRANGM PRMLPSVTSS  420
PLLPPDLVEC TQAKVAIQPS VRAPSASVEL LEGAIGASSG PLESRVSQQS ALPSSGFSAN  480
MLPVHGSFSN NGASFSSNGA TRLGDAFSAS FRPTNDLTVA RGTKVGAGSF GGTIHLSPDT  540
EQKYVSFGSS DSLLDPKLVW SSSQLPSNIG AHYHSMSQRS NNCSIDSSHG GRMFGQTSAS  600
ASTAAPQTKF DILFSGDTSM ARNASESGAQ RLQSELSSST CSFDGLLNSM IKVEKDDAAF  660
GGDDLGCDFY SLGACI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-109ARR-B family protein