PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG051490.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 398aa    MW: 43124.4 Da    PI: 4.6391
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG051490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.18.9e-18133181355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       ++G+r+++ +g+W+AeIrdps+     r++lg+f +aeeAa+a++  +++++g
  TRIDC6AG051490.1 133 FRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFNSAEEAARAYDVEARRIRG 181
                       8*******.**********965...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MCGGAILKDL KVPAPARKVT AAVLWPEKNK PKRADGGGRR LAGLGRRGGR GLDDGEEDFQ  60
ADFEEFEADS GDSDVELGRA GVAGKDGDDE VVEIKPFAAV KRSLSQDDLS TMTTAGFDGP  120
AQRSAKRKRK NEFRGIRQRP WGKWAAEIRD PSKGVRVWLG TFNSAEEAAR AYDVEARRIR  180
GKKAKVNFPE EPTVPQKRRA CPAAPKVPKS SVAQEPTVIP AVNNLANPNA FVYPSADFAS  240
KQPLVQPDNM PFVPAINSAA SVEAPVMNMY SDQGSNSFGC SDLGWEYDTK TPDISSIAPI  300
STIAEGTESA VLQSKTYNPA VIAEGAESAP VQSNTYNSVV PPVMENNAVD FEPWMRFLLD  360
DGVDEPIDSL LNFDVPQDVV GNMDLWSFDD MPICGKIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.28e-38ERF family protein