PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG050990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 169aa MW: 18290.5 Da PI: 11.4706 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.3 | 3.4e-17 | 23 | 72 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr++k +g+Wv+eIr p++ r r++lg+++ +e+Aa+a +aa +l+g TRIDC6AG050990.1 23 KYKGVRRRK-WGKWVSEIRLPNS---RERIWLGSYDAPEKAARAFDAAFVCLRG 72 8*****998.**********933...5*********************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
GMSTLSPVSG AASPEAEGGG GRKYKGVRRR KWGKWVSEIR LPNSRERIWL GSYDAPEKAA 60 RAFDAAFVCL RGPGAAGADL NFPDSPPPPC RHSVDPQEVQ AAALSHANRA AVSVREAAAA 120 LMEDDCSRAP AALSTEQWPV TWRPRRTAAW TGARSWRTSR RSSRRRPAG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 31 | KGVRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 2e-22 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG050990.1 |