PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG049470.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 266aa    MW: 31038.5 Da    PI: 6.5221
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG049470.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.11.7e-07116158145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       r +W++ + +l++++ +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC6AG049470.3 116 RAKWSKSDTDLFYQGLQQFGSN-FAMIQQLFP-DKSRDQVRQKFK 158
                       569*****************99.*********.*********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MKDKLTERTD KKLTHRIRQK RTKVSEVKTL LEKPDHQIAH MKLSVMHLRL LQEARERIKS  60
KTILSGPSSS NQSSQFGGTD TFDPFGENYD NDRIENHVLE NATKLNYYSY MNKQTRAKWS  120
KSDTDLFYQG LQQFGSNFAM IQQLFPDKSR DQVRQKFKTE EKKHPMQVHD AILHRSRDTL  180
YLKQVIKQLN IEDLQRGMNS AQKQEVGSIE GDTGNEHVLQ DFIEEEENGS NWSDKELGTR  240
QSEAREGEHV SGNADDDLDL DVFDWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.17e-34MYB_related family protein