PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG049470.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 171aa    MW: 19857.2 Da    PI: 6.5162
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG049470.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.28e-0868110145
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                        r +W++ + +l++++ +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC6AG049470.11  68 RAKWSKSDTDLFYQGLQQFGSN-FAMIQQLFP-DKSRDQVRQKFK 110
                        569*****************99.*********.*********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
ASYFYHGDAL LIQIGHLNLA LLLQFSQFGG TDTFDPFGEN YDNDRIENHV LENATKLNYY  60
SYMNKQTRAK WSKSDTDLFY QGLQQFGSNF AMIQQLFPDK SRDQVRQKFK TEEKKHPMQV  120
HDAILHRSRD TLYLKQVIKQ LNIEDLQRGM NSAQKQEVGS IEGDTGNESI L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.14e-32MYB_related family protein