PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG049350.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 297aa    MW: 32374.4 Da    PI: 10.1285
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG049350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57343.77.9e-14100185697
            DUF573   6 lwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                       +ws+ De++lL     f+ ++g  p   d+ a+++ +++sis ++ +  +  K++rLK Kf + v         ++ + h+q   +l+kk+Wg
  TRIDC6AG049350.1 100 VWSDADEVALLNSAAAFRVRHGRVPGLpDMGALFDAIRGSISPHIDQPKVYYKLKRLKSKFDHAVPS-------AVVSRHEQRLRDLCKKVWG 185
                       8*********************966545*************************************99.......8999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
PSPSGSRKRS SRPRPRPDDG RPEPYPSPRG SPSRRSERTR RPRAPPDSDA VTAPADRRAR  60
APSPALRRPV RAFQEAAALA ALAASAPAAS SSGARSYGVV WSDADEVALL NSAAAFRVRH  120
GRVPGLPDMG ALFDAIRGSI SPHIDQPKVY YKLKRLKSKF DHAVPSAVVS RHEQRLRDLC  180
KKVWGANFGL PAEKDAAPEE EEDDEEEERG RGNVPDAAAM LPVATEVLDA YWKTDGPALS  240
GVSLEKGLSK LATEDARWIE AKWRRQLDAE VHSQIKRHDL AKEVYGLLLD AIKGLGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.12e-08GeBP family protein