PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG048840.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 288aa    MW: 31697.6 Da    PI: 5.1217
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG048840.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57343.21.1e-1399188297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkv.sksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                       +f+r+ws +De+ +L +l   ++++g+ p+ d  a+++ + ++++ ++  +++l  K+  L++++   +kk   g+    skehd+ ++elsk
  TRIDC6AG048840.1  99 AFSRIWSTDDEVRILEALAAHQKQHGTLPQPD--ALVDALAGKLDNRAyGSKELQGKVLALRRRYLALSKK---GEL--PSKEHDRRVLELSK 184
                       699***********************887775..8999999999887516889****************99...544..5799********** PP

            DUF573  94 kiWg 97 
                       ++W+
  TRIDC6AG048840.1 185 MVWE 188
                       ***7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
PAPAATPKNK PPPPQQGGDS DSSDEEEEEE PTKTAPRSAP KKQPPPPPPR QGEESDASDE  60
EEEEGESEEE APPPPKLAPK QAPEGRKPQA AAETKKPAAF SRIWSTDDEV RILEALAAHQ  120
KQHGTLPQPD ALVDALAGKL DNRAYGSKEL QGKVLALRRR YLALSKKGEL PSKEHDRRVL  180
ELSKMVWEGG DMVTAAAASA KSAKAANGQE PKGFEEMCDL YPYLAEHVKE LDAANPGIFK  240
RQFGMMDEDK ARAMDEKIKR QRVAQMKVEL RRHDLVREVT KAIIDLVD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1257262KIKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.17e-10GeBP family protein