PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG048710.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HB-other | ||||||||
Protein Properties | Length: 171aa MW: 19615.4 Da PI: 8.0279 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66.9 | 2.7e-21 | 17 | 72 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t+ q+++Le++F+++++p++++r +L+++lgL+ rq+k+WFqNrR+++k TRIDC6AG048710.4 17 KKRYHRHTPRQIQQLEAMFKECPHPDENQRLHLSRELGLEPRQIKFWFQNRRTQMK 72 678899***********************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MDFGDDLVPG SDAHRRKKRY HRHTPRQIQQ LEAMFKECPH PDENQRLHLS RELGLEPRQI 60 KFWFQNRRTQ MKAQHERADN CFLRAENDKI RCENIAMREA LKNVICPTCG GPHSGADDYF 120 DEHKLRMENA HLKEEASIAR RLPASPPPAF ACPAAICADT TIAMVVLVGC S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 2e-67 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG048710.4 |