PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG047960.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 244aa MW: 26600.6 Da PI: 4.255 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.1 | 1.2e-09 | 1 | 25 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Ia++++ gRt++++k++w+++l TRIDC6AG047960.6 1 RWSAIAKHLP-GRTDNEIKNFWNTHL 25 4*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
RWSAIAKHLP GRTDNEIKNF WNTHLKKKLI QMGFDPMTHR PRTDFFAALP QLIALANLRQ 60 LVEQRPWDDQ SASQLQADAV QAAKLEYLQC LLQSAAAIAT SPSSSSINTI PTDLQQIGLL 120 SPSQMSSLSS LSSPRILEGI NGQDLVTGQV SDIQIPSSSF FEHEQPIING TNQNSDYSAN 180 SGEGENGTQK PLLLSEDSLP PLADFPISNL GDACSTSSCD AEGNGTQLPI WSDSFYDEFM 240 SEFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 2e-36 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG047960.6 |