PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG047960.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 364aa MW: 40095.9 Da PI: 5.0885

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG047960.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.9	5.6e-19	47	94	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d+++++G g+W++ ++ g++R++k+c++rw +yl TRIDC6AG047960.5 47 KGPWTPEEDQKLTDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 94 79********************************************97 PP
2	Myb_DNA-binding	58.3	1.8e-18	100	145	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC6AG047960.5 100 RGKFTPEEEQTILQLHSVLGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 145 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
GNPKDQAREE RQIALSPSFP PAPSYPNSIS ILSMGRSPCC DENGLKKGPW TPEEDQKLTD 60 YIEKHGHGSW RALPKLAGLN RCGKSCRLRW TNYLRPDIKR GKFTPEEEQT ILQLHSVLGN 120 KWSAIAKHLP GRTDNEIKNF WNTHLKKKLI QMGFDPMTHR PRTDFFAALP QLIALANLRQ 180 LVEQRPWDDQ SASQLQADAV QAAKLEYLQC LLQSAAAIAT SPSSSSINTI PTDLQQIGLL 240 SPSQMSSLSS LSSPRILEGI NGQDLVTGQV SDIQIPSSSF FEHEQPIING TNQNSDYSAN 300 SGEGENGTQK PLLLSEDSLP PLADFPISNL GDACSTSSCD AEGNGTQLPI WSDSFYDEFM 360 SEFA

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

GNPKDQAREE RQIALSPSFP PAPSYPNSIS ILSMGRSPCC DENGLKKGPW TPEEDQKLTD  60
YIEKHGHGSW RALPKLAGLN RCGKSCRLRW TNYLRPDIKR GKFTPEEEQT ILQLHSVLGN  120
KWSAIAKHLP GRTDNEIKNF WNTHLKKKLI QMGFDPMTHR PRTDFFAALP QLIALANLRQ  180
LVEQRPWDDQ SASQLQADAV QAAKLEYLQC LLQSAAAIAT SPSSSSINTI PTDLQQIGLL  240
SPSQMSSLSS LSSPRILEGI NGQDLVTGQV SDIQIPSSSF FEHEQPIING TNQNSDYSAN  300
SGEGENGTQK PLLLSEDSLP PLADFPISNL GDACSTSSCD AEGNGTQLPI WSDSFYDEFM  360
SEFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-104	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG047960.5