PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG047960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 331aa MW: 36519.9 Da PI: 5.0541 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59 | 1.1e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d+++++G g+W++ ++ g++R++k+c++rw +yl TRIDC6AG047960.1 14 KGPWTAEEDQKLTDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 58.4 | 1.6e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC6AG047960.1 67 RGKFTPEEEQTILQLHSVLGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MGRSPCCDEN GLKKGPWTAE EDQKLTDYIE KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF TPEEEQTILQ LHSVLGNKWS AIAKHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHRPRT DFFAALPQLI ALANLRQLVE QRPWDDQSAS QLQADAVQAA KLEYLQCLLQ 180 SAAAIATSPS SSSINTIPTD LQQIGLLSPS QMSSLSSLSS PRILEGINGQ DLVTGQVSDI 240 QIPSSSFFEH EQPIINGTNQ NSDYSANSGE GENGTQKPLL LSEDSLPPLA DFPISNLGDA 300 CSTSSCDAEG NGTQLPIWSD SFYDEFMSEF A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 1e-103 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG047960.1 |