PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG047440.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 288aa    MW: 31167.5 Da    PI: 9.8851
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG047440.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.2e-1399150155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +rr+h ++Er+RR+++N+ ++ Lr+ +P++   ++++ + a+i+  A++++k+L+
  TRIDC6AG047440.4  99 QRRNHIAVERNRRRQMNDYLAVLRSSMPPS---YAQRGDQASIVAGAINFVKELE 150
                       79****************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MALEAVVFPH EHLACSTDKV AAAMSMYAPS LGRGISIVDE FEEKGGVVLQ EEAANYAWAA  60
AAPTTPAASG RGKASSSAAA RRRRRRPKAV KNREETESQR RNHIAVERNR RRQMNDYLAV  120
LRSSMPPSYA QRGDQASIVA GAINFVKELE QLLQSLEAQK RRRAQLASTP PFAGFFTFPQ  180
YSVGAGAGAA DGSGARRGVA DVEVAVAESH ASVKVLAPRR PRQLVRMVVA MQCLGLTVLH  240
LNATATADHL VFYSFSLRME DECRLSTVDE IAAAVHQMVA EVHARGPC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18186RRRRRR
2101111RNHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.15e-48bHLH family protein