PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG046900.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 341aa    MW: 37937 Da    PI: 8.7479
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG046900.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP47.92.2e-154452571
           E2F_TDP 25 vtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                      + l++++++L    v  +rRRiYDi+NVLe+++++++k+kn+++w+g
  TRIDC6AG046900.3  4 IGLDDASRRL---GV--ERRRIYDIVNVLESVGILARKAKNRYSWIG 45
                      78999*****...99..****************************98 PP
2E2F_TDP76.92e-24124204171
           E2F_TDP   1 rkeksLrlltqkflklleksee.givtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwkg 71 
                       rkeksL+lltq+f+kl+ + e+  +++l+e+ak L+ e     ++++k+RR+YDi+NVL++l+liek    ++k+++ w g
  TRIDC6AG046900.3 124 RKEKSLGLLTQNFVKLFLTMEQvSTISLDEAAKFLLGEgheesNMRTKVRRLYDIANVLSSLKLIEKtqvdTRKPAFWWLG 204
                       79*****************9999********************************************99999999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
VESIGLDDAS RRLGVERRRI YDIVNVLESV GILARKAKNR YSWIGFGGVP MALRELKERA  60
LREKSGLAPL PAEELSAANM SDDEDDDKLG DPEAEREGEK LSQTVDNPSD MPDAPPCRLR  120
SDHRKEKSLG LLTQNFVKLF LTMEQVSTIS LDEAAKFLLG EGHEESNMRT KVRRLYDIAN  180
VLSSLKLIEK TQVDTRKPAF WWLGMAGKPK AENGVTIVAS PARKTLSNKR VFGTELTNIG  240
INRSQLEPTT QKKAKLAQGG ADILKSYNVA AQKQPGQVNK SGFVYGPFHP SCARKQEPDD  300
CNNVGQRAIA HDWESLADSF RPQYQNPGWY LSALLWSGFV P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.12e-76E2F/DP family protein