PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG046080.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 149aa    MW: 16810.9 Da    PI: 8.0177
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG046080.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.7e-1665116155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++ k+grW A+I       g ++ ++lg+f t+eeAa+a++ a+ +++g
  TRIDC6AG046080.5  65 SIYRGVTRRQKDGRWQARIGLiA---G-TRDIYLGTFKTEEEAAEAYDIAAIEIRG 116
                       57****************88832...2.5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
GSYDTEQKAA RAYDVAALKF FGLNTKLNFS ISEYEKELAD IQDMSPEECV TYLRRRSSCF  60
SRGASIYRGV TRRQKDGRWQ ARIGLIAGTR DIYLGTFKTE EEAAEAYDIA AIEIRGKNAV  120
TNFDRSNYMD RGMHCIEGAG LKLLATKPE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15475RRRSSCFSRGASIYRGVTRRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.12e-45AP2 family protein