PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG044660.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CO-like | ||||||||
Protein Properties | Length: 430aa MW: 46699.1 Da PI: 7.2028 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 26.1 | 1.8e-08 | 18 | 59 | 3 | 38 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +r C+ + + +++++C ++ +lC+ C ++ H+ H+ TRIDC6AG044660.4 18 ARACDGCMRRRARWYCAADDAFLCQGCDTSVHSAnplarrHE 59 578*****************************6567777776 PP | |||||||
2 | CCT | 66.9 | 5.4e-23 | 374 | 416 | 1 | 43 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+++RY+eKr+tR+F KkirYe+RK +Ae+RpR+KGrFvk+ TRIDC6AG044660.4 374 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKR 416 9****************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 430 aa Download sequence |
MGGSDQKAAG GAVGGKAARA CDGCMRRRAR WYCAADDAFL CQGCDTSVHS ANPLARRHER 60 LRLCATSPLP AERGKAVKES SGATTSKCLD VAPAWPRRKA RTRRPPVKSV GQLLSRRLVV 120 PEVGAGESST SDERRAPEEE QLLYRVPVFD PALAEFCSPP PIDGSRHSED VEGAVEDAKE 180 LTAEQSPVQE LPDCFASFGP TDADLREFAA DMEALLGQGL DDGKELEDSF YMEAPGLISP 240 PGEHGGRVKV EADGGLVSRS NGVLASGHDL KREFNGSPPT LVDDDDSFEH KTSSASNGDG 300 VDDAQFLKRS LDLRLNYEAV MESWGSSPWT DGRRPPGQLD DLLLHDHAGT WTAGGGGRHG 360 DAAWPPRPRT DEWREARVSR YREKRRTRLF AKKIRYEVRK LNAEKRPRMK GRFVKRTGAA 420 AAAGAPCAVT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 96 | 102 | PRRKART |
2 | 385 | 401 | RRTRLFAKKIRYEVRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25440.1 | 1e-68 | CO-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG044660.4 |