PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG044320.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 342aa MW: 37802.4 Da PI: 4.8491 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.4 | 1.6e-20 | 78 | 131 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e+++eLA+klgL+ rqV vWFqNrRa++k TRIDC6AG044320.3 78 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWK 131 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.6 | 6.2e-42 | 77 | 168 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv+lLE+sFeee+kLeperK+elar+LglqprqvavWFqnrRAR+ktk lE+d+++Lk+++dal++++++L +++++Lr+++ TRIDC6AG044320.3 77 EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKTLERDFDRLKASFDALRADHDALLQDNHRLRSQVV 168 69**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence |
GARPAHLQHV GLRQRTDALH GLRRGRHRRR GRHVPSSDEG VRPVLGGMEE GRGVKRPFFT 60 SPDDMLEEEY YDEQLPEKKR RLTPEQVHLL ERSFEEENKL EPERKTELAR KLGLQPRQVA 120 VWFQNRRARW KTKTLERDFD RLKASFDALR ADHDALLQDN HRLRSQVVTL TEKMQDKEAP 180 EGSFGAAADA SEPEQAAAEA KASLADAEEQ AAAAEAFEVV QQQLHVKDEE RLSPGSGGSA 240 VLDARDALLG SGCGLAGVVD SSVDSYCFPG GAGGDEYHEC VVGPVAGGIH SEEDDGAGSD 300 EGCSYYPDDA AVFFAAAQGH GHHHTDDDDQ QDDGQISYWM WN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 1e-56 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG044320.3 |