PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG041360.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 245aa MW: 26669.7 Da PI: 10.4006

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG041360.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.3	6.3e-24	125	169	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++ +++k+CErH+hrgr+rsrk++e+ TRIDC6AG041360.6 125 DPEPGRCRRTDGKKWRCAKEAASDSKYCERHMHRGRNRSRKPVET 169 79****************************************997 PP
2	QLQ	62	1.6e-21	63	98	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ TRIDC6AG041360.6 63 PFTAAQYEELEHQALIYKYLVAGVPVPPDLVLPIRR 98 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
WRCRMPLFPR QATAAPPRPP PPPPPSSPSA VPPPSPRKHP PGGNGGMGEE ARMDGRWMAR 60 PVPFTAAQYE ELEHQALIYK YLVAGVPVPP DLVLPIRRGI ESLAARFYHN PLAIGYGSYL 120 GKKVDPEPGR CRRTDGKKWR CAKEAASDSK YCERHMHRGR NRSRKPVETQ LVPHSQPPAA 180 SAVPPLATGF HSHSLYPAIG DFRLGARGQS VPMIDLCSGG TGTAVQGVRL ALAQGLFHVG 240 IPHME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG041360.6