PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG041360.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 408aa MW: 43550.4 Da PI: 8.1212

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG041360.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.3	1.3e-23	121	165	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++ +++k+CErH+hrgr+rsrk++e+ TRIDC6AG041360.4 121 DPEPGRCRRTDGKKWRCAKEAASDSKYCERHMHRGRNRSRKPVET 165 79****************************************997 PP
2	QLQ	61.1	3.2e-21	59	94	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ TRIDC6AG041360.4 59 PFTAAQYEELEHQALIYKYLVAGVPVPPDLVLPIRR 94 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MAMPYASLSP AGDRRSSPAA TATASLLPFC RSSPFSAGGN GGMGEEARMD GRWMARPVPF 60 TAAQYEELEH QALIYKYLVA GVPVPPDLVL PIRRGIESLA ARFYHNPLAI GYGSYLGKKV 120 DPEPGRCRRT DGKKWRCAKE AASDSKYCER HMHRGRNRSR KPVETQLVPH SQPPAASAVP 180 PLATGFHSHS LYPAIGGGTN GGGGGGNNGM SMPGTFSSAL GPPQQHMGNN AASPYAALGG 240 AGTCKDFRYT AYGIRSLADE QSQLMTEAMN TSVENPWRLP PSSQTTTFPL SSYSPQLGAT 300 SDLGQNNSSN NNSGVKAERQ QQQQPLSFPG CGDFGGGDSA KQENQTLRPF FDEWPKTRDS 360 WSDLTDDNSN VASFSATQLS ISIPMTSSDF SAASSQSPNG MLFAGEMY

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MAMPYASLSP AGDRRSSPAA TATASLLPFC RSSPFSAGGN GGMGEEARMD GRWMARPVPF  60
TAAQYEELEH QALIYKYLVA GVPVPPDLVL PIRRGIESLA ARFYHNPLAI GYGSYLGKKV  120
DPEPGRCRRT DGKKWRCAKE AASDSKYCER HMHRGRNRSR KPVETQLVPH SQPPAASAVP  180
PLATGFHSHS LYPAIGGGTN GGGGGGNNGM SMPGTFSSAL GPPQQHMGNN AASPYAALGG  240
AGTCKDFRYT AYGIRSLADE QSQLMTEAMN TSVENPWRLP PSSQTTTFPL SSYSPQLGAT  300
SDLGQNNSSN NNSGVKAERQ QQQQPLSFPG CGDFGGGDSA KQENQTLRPF FDEWPKTRDS  360
WSDLTDDNSN VASFSATQLS ISIPMTSSDF SAASSQSPNG MLFAGEMY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG041360.4