PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG041360.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 359aa MW: 38639.8 Da PI: 7.9161

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG041360.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74.5	1.1e-23	79	123	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++ +++k+CErH+hrgr+rsrk++e+ TRIDC6AG041360.3 79 DPEPGRCRRTDGKKWRCAKEAASDSKYCERHMHRGRNRSRKPVET 123 79****************************************997 PP
2	QLQ	61.3	2.7e-21	17	52	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTaaQ ++L++Q+l+yKyL+a++PvPp+L+++i++ TRIDC6AG041360.3 17 PFTAAQYEELEHQALIYKYLVAGVPVPPDLVLPIRR 52 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MGEEARMDGR WMARPVPFTA AQYEELEHQA LIYKYLVAGV PVPPDLVLPI RRGIESLAAR 60 FYHNPLAIGY GSYLGKKVDP EPGRCRRTDG KKWRCAKEAA SDSKYCERHM HRGRNRSRKP 120 VETQLVPHSQ PPAASAVPPL ATGFHSHSLY PAIGGGTNGG GGGGNNGMSM PGTFSSALGP 180 PQQHMGNNAA SPYAALGGAG TCKDFRYTAY GIRSLADEQS QLMTEAMNTS VENPWRLPPS 240 SQTTTFPLSS YSPQLGATSD LGQNNSSNNN SGVKAERQQQ QQPLSFPGCG DFGGGDSAKQ 300 ENQTLRPFFD EWPKTRDSWS DLTDDNSNVA SFSATQLSIS IPMTSSDFSA ASSQSPNGM

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MGEEARMDGR WMARPVPFTA AQYEELEHQA LIYKYLVAGV PVPPDLVLPI RRGIESLAAR  60
FYHNPLAIGY GSYLGKKVDP EPGRCRRTDG KKWRCAKEAA SDSKYCERHM HRGRNRSRKP  120
VETQLVPHSQ PPAASAVPPL ATGFHSHSLY PAIGGGTNGG GGGGNNGMSM PGTFSSALGP  180
PQQHMGNNAA SPYAALGGAG TCKDFRYTAY GIRSLADEQS QLMTEAMNTS VENPWRLPPS  240
SQTTTFPLSS YSPQLGATSD LGQNNSSNNN SGVKAERQQQ QQPLSFPGCG DFGGGDSAKQ  300
ENQTLRPFFD EWPKTRDSWS DLTDDNSNVA SFSATQLSIS IPMTSSDFSA ASSQSPNGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-45	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG041360.3