PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG041080.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 481aa MW: 50412.1 Da PI: 6.1879

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG041080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.7	3.8e-31	229	287	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY++eHnh+ TRIDC6AG041080.1 229 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPNMLVITYTSEHNHP 287 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MCDYFLKRAE GHQQAGDLTD IVRAGGAMPA GSADPPSTAT EWLQLPADPI LFPLPQTSSS 60 DGAGPSSADA LGDPFSGLPD AFSTDYPSSS GSAAADFFDA VQDAMGVGMA KQVGFVDTTG 120 CGGGGTTAGA GGGFLDMRNH HMFPGEMPMR GLSPYALMGG GAAKLGVPMA GHGLAAGPCA 180 FDAVAGLQMS SSPRGGGIKR RKNQARKVVC IPAPAAAVAG KTTGEVVPSD LWAWRKYGQK 240 PIKGSPYPRG YYRCSSSKGC PARKQVERSR TDPNMLVITY TSEHNHPWPT QRNVLAGSTR 300 SHYAKNSSNT DAASSKNSKN SSRNQHKPVV KAESKDQSAA TPAATSTTTT ATTSTGNNTP 360 PMAVKEEAEM ERRIGGDTTA TVGYYSDHLL QQMFSQSYRP MMPEEAGGYH QQDDFFADLT 420 ELDSDPVSLI FSTEYMEARP GKEKAAAKDD VDSLFMMDWA PASAAVTTSA GSALEQGDMG 480 L

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MCDYFLKRAE GHQQAGDLTD IVRAGGAMPA GSADPPSTAT EWLQLPADPI LFPLPQTSSS  60
DGAGPSSADA LGDPFSGLPD AFSTDYPSSS GSAAADFFDA VQDAMGVGMA KQVGFVDTTG  120
CGGGGTTAGA GGGFLDMRNH HMFPGEMPMR GLSPYALMGG GAAKLGVPMA GHGLAAGPCA  180
FDAVAGLQMS SSPRGGGIKR RKNQARKVVC IPAPAAAVAG KTTGEVVPSD LWAWRKYGQK  240
PIKGSPYPRG YYRCSSSKGC PARKQVERSR TDPNMLVITY TSEHNHPWPT QRNVLAGSTR  300
SHYAKNSSNT DAASSKNSKN SSRNQHKPVV KAESKDQSAA TPAATSTTTT ATTSTGNNTP  360
PMAVKEEAEM ERRIGGDTTA TVGYYSDHLL QQMFSQSYRP MMPEEAGGYH QQDDFFADLT  420
ELDSDPVSLI FSTEYMEARP GKEKAAAKDD VDSLFMMDWA PASAAVTTSA GSALEQGDMG  480
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	4e-63	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG041080.1