PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC6AG040920.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 122aa MW: 13124.6 Da PI: 6.5034 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 73 | 4.2e-23 | 1 | 41 | 15 | 55 |
G2-like 15 veaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 v+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ TRIDC6AG040920.6 1 VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 41 89**************************************7 PP | |||||||
2 | Myb_DNA-binding | 28.6 | 3.3e-09 | 1 | 40 | 13 | 48 |
HHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 13 vdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ TRIDC6AG040920.6 1 VHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 40 68************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 122 aa Download sequence |
VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TIKTTDHKPA AASSYGQAKT 60 IIDIPDDSSF DIANTSGSES SVQQSNLDGN EHGSNMCALW SNNSSRTCNR SAPMSSPTMP 120 PT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G32240.1 | 7e-28 | G2-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC6AG040920.6 |