PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG039820.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 262aa MW: 29247.1 Da PI: 9.8232 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.9 | 1.1e-13 | 14 | 58 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky TRIDC6AG039820.5 14 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 58 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
SKKVRKPYTI TKSRESWTEQ EHDKFLEALQ LFDRDWKKIE AFVGSKTVIQ IRSHAQKYFL 60 KVQKNGTSEH VPPPRPKRKA AHPYPQKASK NESGYALKTD PSAMLRNSGM NVAVSPWTHN 120 SIPPVVASSF MKEDLGAGSM GPNIFCSSSS EGPPRAWQSG ETNDQINQVP SLRIMPDFAQ 180 VYSFLGSVFD PSTKGHLQKL KEMNPIDVET ALLLMRNLSI NLTSPDFEDQ RKLLSSYNST 240 SDGLELGSSR SSLLTDNALS LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.1 | 2e-89 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG039820.5 |