PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039820.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 260aa    MW: 29030.9 Da    PI: 9.9453
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039820.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-131357147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6AG039820.3 13 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 57
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
KKVRKPYTIT KSRESWTEQE HDKFLEALQL FDRDWKKIEA FVGSKTVIQI RSHAQKYFLK  60
VQKNGTSEHV PPPRPKRKAA HPYPQKASKN ESGYALKTDP SAMLRNSGMN VAVSPWTHNS  120
IPPVVASSFM KDLGAGSMGP NIFCSSSSEG PPRAWQSGET NDQINQVPSL RIMPDFAQVY  180
SFLGSVFDPS TKGHLQKLKE MNPIDVETAL LLMRNLSINL TSPDFEDQRK LLSSYNSTSD  240
GLELGSSRSS LLTDNALSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.28e-89MYB_related family protein