PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039820.22
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 339aa    MW: 37739.3 Da    PI: 8.8209
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039820.22genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-132569147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6AG039820.22 25 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 69
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
EAAAAASSDD ASKKVRKPYT ITKSRESWTE QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI  60
QIRSHAQKYF LKVQKNGTSE HVPPPRPKRK AAHPYPQKAS KNESGYALKT DPSAMLRNSG  120
MNVAVSPWTH NSIPPVVASS FMKDLGAGSM GPNIFCSSSS EGPPRAWQSG ETNDQINQVP  180
SLRIMPDFAQ VYSFLGSVFD PSTKGHLQKL KEMNPIDVET ALLLMRNLSI NLTSPDFEDQ  240
AVSFRCLTPY LVSSRSYFFP IKKLQRISTA CSCLLELGCL FTHCASSRVC PIAMVSAFLV  300
LSVQLVATVQ NDWNIWAAIM CLESSCFANF QNYQKFGMC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.23e-84MYB_related family protein