PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039820.20
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 230aa    MW: 25961.6 Da    PI: 9.7465
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039820.20genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.29e-142670147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6AG039820.20 26 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 70
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
SEAAAAASSD DASKKVRKPY TITKSRESWT EQEHDKFLEA LQLFDRDWKK IEAFVGSKTV  60
IQIRSHAQKY FLKVQKNGTS EHVPPPRPKR KAAHPYPQKA SKNESGYALK TDPSAMLRNS  120
GMNVAVSPWT HNSIPPVVAS SFMKVMPDFA QVYSFLGSVF DPSTKGHLQK LKEMNPIDVE  180
TALLLMRNLS INLTSPDFED QVSSYPTFRY AIDHICTKLF TAFSCYQQLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.24e-78MYB_related family protein