PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039820.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 335aa    MW: 37455 Da    PI: 8.8209
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039820.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.6e-132064147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6AG039820.2 20 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 64
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
ASSDDASKKV RKPYTITKSR ESWTEQEHDK FLEALQLFDR DWKKIEAFVG SKTVIQIRSH  60
AQKYFLKVQK NGTSEHVPPP RPKRKAAHPY PQKASKNESG YALKTDPSAM LRNSGMNVAV  120
SPWTHNSIPP VVASSFMKED LGAGSMGPNI FCSSSSEGPP RAWQSGETND QINQVPSLRI  180
MPDFAQVYSF LGSVFDPSTK GHLQKLKEMN PIDVETALLL MRNLSINLTS PDFEDQAVSF  240
RCLTPYLVSS RSYFFPIKKL QRISTACSCL LELGCLFTHC ASSRVCPIAM VSAFLVLSVQ  300
LVATVQNDWN IWAAIMCLES SCFANFQNYQ KFGMC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.13e-86MYB_related family protein