PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039820.18
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 266aa    MW: 29790.8 Da    PI: 9.461
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039820.18genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-132266147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6AG039820.18 22 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 66
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
AAASSDDASK KVRKPYTITK SRESWTEQEH DKFLEALQLF DRDWKKIEAF VGSKTVIQIR  60
SHAQKYFLKV QKNGTSEHVP PPRPKRKAAH PYPQKASKNE SGYALKTDPS AMLRNSGMNV  120
AVSPWTHNSI PPVVASSFMK DLGAGSMGPN IFCSSSSEGP PRAWQSGETN DQINQVPSLR  180
IMPDFAQVYS FLGSVFDPST KGHLQKLKEM NPIDVETALL LMRNLSINLT SPDFEDQVSS  240
YPTFRYAIDH ICTKLFTAFS CYQQLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.28e-84MYB_related family protein