PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG039820.15 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 337aa MW: 37597.1 Da PI: 8.8209 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.4 | 1.6e-13 | 22 | 66 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky TRIDC6AG039820.15 22 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 66 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
AAASSDDASK KVRKPYTITK SRESWTEQEH DKFLEALQLF DRDWKKIEAF VGSKTVIQIR 60 SHAQKYFLKV QKNGTSEHVP PPRPKRKAAH PYPQKASKNE SGYALKTDPS AMLRNSGMNV 120 AVSPWTHNSI PPVVASSFMK EDLGAGSMGP NIFCSSSSEG PPRAWQSGET NDQINQVPSL 180 RIMPDFAQVY SFLGSVFDPS TKGHLQKLKE MNPIDVETAL LLMRNLSINL TSPDFEDQAV 240 SFRCLTPYLV SSRSYFFPIK KLQRISTACS CLLELGCLFT HCASSRVCPI AMVSAFLVLS 300 VQLVATVQND WNIWAAIMCL ESSCFANFQN YQKFGMC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.1 | 5e-84 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG039820.15 |