PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039820.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 264aa    MW: 29706.7 Da    PI: 9.2666
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039820.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-131963147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6AG039820.13 19 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 63
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
SSDDASKKVR KPYTITKSRE SWTEQEHDKF LEALQLFDRD WKKIEAFVGS KTVIQIRSHA  60
QKYFLKVQKN GTSEHVPPPR PKRKAAHPYP QKASKNESGY ALKTDPSAML RNSGMNVAVS  120
PWTHNSIPPV VASSFMKEDL GAGSMGPNIF CSSSSEGPPR AWQSGETNDQ INQVPSLRIM  180
PDFAQVYSFL GSVFDPSTKG HLQKLKEMNP IDVETALLLM RNLSINLTSP DFEDQVSSYP  240
TFRYAIDHIC TKLFTAFSCY QQLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-85MYB_related family protein