PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039820.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 341aa    MW: 38262.9 Da    PI: 8.7727
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039820.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.7e-131963147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6AG039820.12 19 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 63
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
SSDDASKKVR KPYTITKSRE SWTEQEHDKF LEALQLFDRD WKKIEAFVGS KTVIQIRSHA  60
QKYFLKVQKN GTSEHVPPPR PKRKAAHPYP QKASKNESGY ALKTDPSAML RNSGMNVAVS  120
PWTHNSIPPV VASSFMKDLG AGSMGPNIFC SSSSEGPPRA WQSGETNDQI NQVPSLRIMP  180
DFAQVYSFLG SVFDPSTKGH LQKLKEMNPI DVETALLLMR NLSINLTSPD FEDQAVSFRC  240
LTPYLVSSRS YFFPIKKLQR ISTACSCLLE LGCLFTHCAS SRVCPIAMVS AFLVLSVQLV  300
ATVQNDWNIW AAIMCLESSC FANFQNYQKF EEVAVFVQFH L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.25e-86MYB_related family protein