PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039820.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 143aa    MW: 16353.9 Da    PI: 10.7521
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039820.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.43.8e-141458147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  TRIDC6AG039820.11 14 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 58
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
SKKVRKPYTI TKSRESWTEQ EHDKFLEALQ LFDRDWKKIE AFVGSKTVIQ IRSHAQKYFL  60
KVQKNGTSEH VPPPRPKRKA AHPYPQKASK NESGYALKTD PSAMLRNSGM NVAVSPWTHN  120
SIPPVVASSF MKGLYSKVPL LYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.21e-48MYB_related family protein