PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG039820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 267aa MW: 29664.5 Da PI: 9.6785 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.9 | 1.1e-13 | 20 | 64 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT++E++++++a +++ + Wk+I + +g +t q++s+ qky TRIDC6AG039820.1 20 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 64 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
ASSDDASKKV RKPYTITKSR ESWTEQEHDK FLEALQLFDR DWKKIEAFVG SKTVIQIRSH 60 AQKYFLKVQK NGTSEHVPPP RPKRKAAHPY PQKASKNESG YALKTDPSAM LRNSGMNVAV 120 SPWTHNSIPP VVASSFMKDL GAGSMGPNIF CSSSSEGPPR AWQSGETNDQ INQVPSLRIM 180 PDFAQVYSFL GSVFDPSTKG HLQKLKEMNP IDVETALLLM RNLSINLTSP DFEDQRKLLS 240 SYNSTSDGLE LGSSRSSLLT DNALSLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.2 | 6e-91 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG039820.1 |