PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG039700.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 216aa MW: 23378.8 Da PI: 10.7878

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG039700.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79	4.4e-25	134	177	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 ++epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr rsrk++e TRIDC6AG039700.4 134 EPEPGRCRRTDGKKWRCSRDVVQGHKYCERHVHRGRGRSRKPVE 177 69***************************************998 PP
2	QLQ	53.4	7.9e-19	68	104	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 sa+T +Q q+L++Q+l+y+y+aa++PvP +L+++i+k TRIDC6AG039700.4 68 SALTFMQQQELEHQVLIYRYFAAGAPVPVHLVLPIWK 104 799*********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
RLAAAAVQAA PPLLRRLERR YVQPHQESCK RAVTMAVLSP LGLGLGLGLG GDSRGEQQAF 60 EARAAAKSAL TFMQQQELEH QVLIYRYFAA GAPVPVHLVL PIWKSVAASS FGPHRFPSLI 120 GLGSLCFDYR SSMEPEPGRC RRTDGKKWRC SRDVVQGHKY CERHVHRGRG RSRKPVEGAP 180 SARAHSDSTA TAPPCAIGFS PAGILHATHS AAARAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36400.1	5e-38	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG039700.4