PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG037080.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 287aa MW: 30955.8 Da PI: 4.8472 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 108 | 6.1e-34 | 26 | 111 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k+ev+aLi++r e++e+ ++ +k+plWe++s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+ql+a TRIDC6AG037080.2 26 RWPKEEVHALIQLRMEKDEHCQDMGAKGPLWEDISAGMRRIGYNRSSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLDA 111 8********************************************************************97.99***********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
SLQLVVAAPE EGGRRGGGES SAGMSRWPKE EVHALIQLRM EKDEHCQDMG AKGPLWEDIS 60 AGMRRIGYNR SSKRCKEKWE NINKYFKKVK ESNKRRPEDS KTCPYFHQLD AIYRKKQSAV 120 SNAAGGCSST ASGNAVAAVN ASASEQHNPW RELEGKISND FDRRHTVGGG SSDAPPGDGE 180 VAAASTVLDA IATTKKSEDN VMAMESNIQS QQTEVTATDE TDSDDIEGNY TDDGDDDDGD 240 EDDKMKYTIE FQKHKEGGSS SAPAAPATAA TVVTSSAPTG RTFLAVQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 12 | 18 | GGRRGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 4e-46 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG037080.2 |