PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG037080.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 310aa    MW: 33302.5 Da    PI: 4.7845
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG037080.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix107.87.1e-3424109187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+k+ev+aLi++r e++e+ ++  +k+plWe++s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+ql+a
  TRIDC6AG037080.1  24 RWPKEEVHALIQLRMEKDEHCQDMGAKGPLWEDISAGMRRIGYNRSSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLDA 109
                       8********************************************************************97.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
QLVVAAPEEG GRRGGGESSA GMSRWPKEEV HALIQLRMEK DEHCQDMGAK GPLWEDISAG  60
MRRIGYNRSS KRCKEKWENI NKYFKKVKES NKRRPEDSKT CPYFHQLDAI YRKKQSAVSN  120
AAGGCSSTAS GNAVAAVNAS ASEQHNPWRE LEGKISNDFD RRHTVGGGSS DAPPGDGEVA  180
AASTVLDAIA TTKVMTQTSE SLSMPSIACN LIAIGLGQKS EDNVMAMESN IQSQQTEVTA  240
TDETDSDDIE GNYTDDGDDD DGDEDDKMKY TIEFQKHKEG GSSSAPAAPA TAATVVTSSA  300
PTGRTFLAVQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11016GGRRGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.14e-46Trihelix family protein